PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM96988.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 79aa    MW: 9652.99 Da    PI: 8.0896
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM96988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2171.7e-053962123
                EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                ++C++C+k+F+   +L +H  + H
  PIM96988.1 39 WRCGYCKKVFRAEKYLDQHFDNrH 62
                58*****************77666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MPFMEKEKYQ LSSRCRLHPS NEIFRDQEEH KIHVDLNEWR CGYCKKVFRA EKYLDQHFDN  60
RHYNLLNVVS GSVFTFLSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63280.17e-31C2H2 family protein