PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM97107.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 247aa    MW: 27070.7 Da    PI: 8.0406
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM97107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-20109159255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  PIM97107.1 109 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAAMAYDRAAYRMRG 159
                 7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MYQPIYSELT PPELPPPVYC RSSSSNSLMP CLTETWGDLP LKVDDAEDMV IYGLLRDAVN  60
TGWTPFNDVK AEPTFEVGSE MSFPTVRTEY VATPPQMAAP AVARPKGRHY RGVRQRPWGK  120
FAAEIRDPAK NGARVWLGTY ETAEEAAMAY DRAAYRMRGS KALLNFPHKI GSHEPEPVRV  180
TAKRRSPEPA VSAASTVTSG SDIVSPKRRK KGAAAEQAET EVESRSSVSQ EECLVMMLPG  240
GGRLVVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-50ERF family protein