PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97206.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

YABBY

Protein Properties

Length: 104aa MW: 11402.9 Da PI: 8.5955

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	67.5	4.9e-21	1	85	1	86
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnv 86 +d+ +sse++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l ++ + q + +h ++sl+++ e k+ +++ +s PIM97206.1 1 MDLAQSSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTKSPIQGHQCYDH-QTSLHQTFCSEFKKGSSSSSSSS 85 57889***************************************988878777777777777.66666666666665555544444 PP

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence
MDLAQSSEHL CYVRCNFCNT VLAVGIPCKR LLDTVTVKCG HCSNLSFLST KSPIQGHQCY 60 DHQTSLHQTF CSEFKKGSSS SSSSSSTSTE PLSPKAPFVV KRRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	5e-27	YABBY family protein