PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM97342.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 301aa    MW: 33381.2 Da    PI: 8.2122
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM97342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.1e-144392255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+  E+rRR++iN++f+ Lr+l+P      ++K + a+ L ++++Y+k Lq
  PIM97342.1 43 RSKHSVTEQRRRSKINERFQILRDLIPYG----DQKRDTASFLLEVIQYVKVLQ 92
                889*************************7....79****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MKSVKGHQEE EEVDEDFGSK KDTTPSNNNT KDGKNSDKIN AMRSKHSVTE QRRRSKINER  60
FQILRDLIPY GDQKRDTASF LLEVIQYVKV LQEKVQKYEG SYQPWGLEPT KLMPWRNSHW  120
RVQSFVSQPQ TATSGSGPVS TLVPTAMQPG QQNPIESDPI RDPSCRSMDP QTELPNRTIG  180
VPSSTVNGCA FSQSLSRAAS DAQSTEYHTV GDSMNRQDEL TIEGGTIIIS SVYSQGLLNS  240
LTKALQSTGV DLSQASISIQ INLGKRANRG LSIAKDHDVA IPRGGQSVSE DFDQTQKRLK  300
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-87bHLH family protein