PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM97357.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 177aa    MW: 20883.3 Da    PI: 6.8797
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM97357.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.16.4e-4861353128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 +GfrF+Pt+eelv++yL++k++g++ ++++vi+ vdiy+++Pw+Lp+    ++++++++w+fF++r++++a+g r+nr tk+gyWkatg+  ev+s+++
  PIM97357.1   6 VGFRFRPTEEELVSYYLREKLKGTTPDIDRVIPVVDIYNYNPWELPQlageRCHGDTEQWFFFTPRQEREARGGRPNRLTKEGYWKATGSPGEVYSSQN 104
                 7***************************99***************9656766666888***************************************** PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 + +g kkt+vfy+grap+g+kt+W m+ey++
  PIM97357.1 105 QRIGRKKTMVFYEGRAPHGRKTSWKMNEYKV 135
                 *****************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MNDLGVGFRF RPTEEELVSY YLREKLKGTT PDIDRVIPVV DIYNYNPWEL PQLAGERCHG  60
DTEQWFFFTP RQEREARGGR PNRLTKEGYW KATGSPGEVY SSQNQRIGRK KTMVFYEGRA  120
PHGRKTSWKM NEYKVFDNYD HEHAGADPQY LKATECYMSD DEFGHHHMYG IVYCFSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-63NAC family protein