PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97436.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 209aa MW: 24521.9 Da PI: 9.6429

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	101.3	9e-32	11	112	2	102
HHHHHHHHHCTG..........GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS HSF_DNA-bind 2 Flkklyeilede..........elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 Fl+k+y++le e +++sw+ +gn fvv+ + ef++ +LpkyFkh+nf+SF+RQLn+YgFkk+ +++ weF+h++F++ PIM97436.1 11 FLSKTYDLLEAEeeerrrgpgdGSGRIVSWNLEGNGFVVWSPAEFSELMLPKYFKHNNFSSFIRQLNTYGFKKTASKR---------WEFQHEKFQR 98 9*******5555666666668999********************************************9988.........****** PP XXXXXXXXXXXXXX CS HSF_DNA-bind 89 gkkellekikrkks 102 g+++ll +i rkk PIM97436.1 99 GRRNLLVEITRKKC 112 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MTRKTRSPAP FLSKTYDLLE AEEEERRRGP GDGSGRIVSW NLEGNGFVVW SPAEFSELML 60 PKYFKHNNFS SFIRQLNTYG FKKTASKRWE FQHEKFQRGR RNLLVEITRK KCEPSAFPPF 120 LKASADCSCS QDHQDKPIEN SNNNYNNSPG LMLMELMEEN KNLRKEKMEL EMQIAHFKNL 180 EFRLLQCLSQ YSAHSTNHCL MMNKARRLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36990.1	3e-37	HSF family protein