PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97576.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 237aa MW: 27250.4 Da PI: 7.9071

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.7	7.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l +v ++G +W++ ++ g+ R++k+c++rw +yl PIM97576.1 14 KGAWSEEEDNKLRAYVLRYGHWNWRLLPKFAGLQRCGKSCRLRWMNYL 61 79****************99**********************97 PP
2	Myb_DNA-binding	54.4	3e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE++l+ +++++ G++ W++Ia++++ gRt++++k++w+ + PIM97576.1 67 RGNYTKEEEDLIRKLHHEIGNK-WSAIAAKLP-GRTDNEIKNHWHAH 111 899*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MVKAAYIDKN GLTKGAWSEE EDNKLRAYVL RYGHWNWRLL PKFAGLQRCG KSCRLRWMNY 60 LKPGVRRGNY TKEEEDLIRK LHHEIGNKWS AIAAKLPGRT DNEIKNHWHA HLNKRTTKRI 120 PKSENFQGEK SCSIITHLEK TEKSEVSSSL SSVDLSSSVE ENCSPGSTSS CFNQGIYDDS 180 AGSSLDPFSG FQESFWTEPF VLDKSDSNID FYNYLLLDED RFFSPNLSSF QYGAINW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	2e-53	MYB family protein