PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97641.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

LBD

Protein Properties

Length: 182aa MW: 20085.9 Da PI: 6.2366

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	140.4	5.8e-44	28	127	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++kll++lpe++r da++s+vyeA+ar+rdP+yG++gvi +lq+q++ql+a+la++++ PIM97641.1 28 PCAACKILRRRCVENCVLAPYFPPTDPLKFTIAHRVFGASNIIKLLQELPENQRADAVNSMVYEANARLRDPIYGCTGVICHLQNQISQLQADLAKAQA 126 7***********************************************************************************************998 PP DUF260 100 e 100 e PIM97641.1 127 E 127 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MDFGRKHDSV STTLSPPPPA PPRVILSPCA ACKILRRRCV ENCVLAPYFP PTDPLKFTIA 60 HRVFGASNII KLLQELPENQ RADAVNSMVY EANARLRDPI YGCTGVICHL QNQISQLQAD 120 LAKAQAEILN MQCQNASLSE LTSKPTLATQ NGQENNMLDQ ENSNFFVDDG NLGVSWGSPW 180 TF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	3e-72	LBD family protein