PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM97688.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 161aa    MW: 17556.7 Da    PI: 10.0796
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM97688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-172473255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ykG+r +k +g+WvAeIr+p   +kr r++lg++ ta  Aa+a++ a  +l+g
  PIM97688.1 24 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTAVAAARAYDTAVYYLRG 73
                69*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MEGGGVSTGG GAARAVSRRR SDKPYKGIRM RKWGKWVAEI REPNKRSRIW LGSYSTAVAA  60
ARAYDTAVYY LRGPTAKLNF PDEISAGGLK DLSAASIRKK AAEVGARVDA LHTNGCVAAQ  120
GDQAINHPST KPSWFQDEID LNKKPKPDPE PESQDPGVEY W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.13e-35ERF family protein