PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM97694.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 474aa    MW: 51985.8 Da    PI: 5.4623
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM97694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS450.88.6e-1381064691374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv++L++cAeav++++++la+al++++  la ++  +m+++a+yf+eALa+++++    +     p+++ e++ s++l++   f+++ P+lkf+h+taN
  PIM97694.1 106 LVHTLMACAEAVQQENMKLADALVKHVGRLAVSQVGAMRKVATYFAEALARKIYK----I----YPQDSLETSYSDVLQM--HFYDTAPYLKFAHFTAN 194
                 689***************************************************9....4....4555554556666555..4**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIle+++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p+++++++l+e+g++La++Ae++gv+fef+ +va++l+dl+ ++L+++p
  PIM97694.1 195 QAILESFAGATRVHVIDFGLNQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQEVGWKLAQLAESIGVEFEFRGFVANSLADLDANMLDIRP 293
                 *************************************************************************************************** PP

        GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgrei 294
                    E++aVn+v+++hrll++++++++    vL+ +k ++Pk+v++veqea+hn++ Fl+rf eal+yys++fdsl + +l++ ++++i++ +++lgr+i
  PIM97694.1 294 snVETVAVNSVFEMHRLLARPGAVDK----VLNSIKAMNPKIVTIVEQEANHNGNVFLDRFNEALHYYSTMFDSLeSCGLSQPNSQDIVMTEVYLGRQI 388
                 999***************99999988....*********************************************8889******************** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +nvva egaer+erhetl++Wr r+++aGF+p +l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++r+L+++SaWr
  PIM97694.1 389 CNVVAYEGAERVERHETLAQWRGRMKSAGFEPEHLGSNAFKQASMLLAVFAgGDGYRVEENDGCLMLGWHTRSLIATSAWR 469
                 ********************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    
MIQSQIGISG ESSSSNQISF SNDRQAVQQD GAKFIYDDDL RAIPGGAIFS NKQKDVVDSE  60
NENKRMKSST GSEFTEKGSS LAGAADAATA ARPMVLVDSQ ETGVRLVHTL MACAEAVQQE  120
NMKLADALVK HVGRLAVSQV GAMRKVATYF AEALARKIYK IYPQDSLETS YSDVLQMHFY  180
DTAPYLKFAH FTANQAILES FAGATRVHVI DFGLNQGMQW PALMQALALR PGGPPTFRLT  240
GIGPPQPDNT DALQEVGWKL AQLAESIGVE FEFRGFVANS LADLDANMLD IRPSNVETVA  300
VNSVFEMHRL LARPGAVDKV LNSIKAMNPK IVTIVEQEAN HNGNVFLDRF NEALHYYSTM  360
FDSLESCGLS QPNSQDIVMT EVYLGRQICN VVAYEGAERV ERHETLAQWR GRMKSAGFEP  420
EHLGSNAFKQ ASMLLAVFAG GDGYRVEEND GCLMLGWHTR SLIATSAWRL RAAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein