PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM97747.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HB-other
Protein Properties Length: 390aa    MW: 43845.5 Da    PI: 7.6006
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM97747.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox15.33.4e-05242276741
                 --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-H CS
    Homeobox   7 ftkeqleeLeelFeknrypsaeereeLAkklgLte 41 
                  +k +l +L   F +++y+s+++++e+Ak l+L+ 
  PIM97747.1 242 SQKGELSTLYISFGSENYLSKKQIQEIAKGLELSN 276
                 556677888888999*****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MDPKQTTFRT LMFPWLAHGH IFPFLELAKT LSKSNFQIYF CSTAINLDSI KKTLNHDDSN  60
VVPIELIELK LPSFQELPSH YHTTKNIPHH LMPTLMKAFQ ESTSNFCKII TNLKPDLLIY  120
DSFQPCAAKM ASSLGIPCVH FATSGSTTFS FCHHWYTHKS YDSFPYKGMY LREYEKRNLV  180
VHGGSIKVEH IGEGFAFGVF ELSCEIVLMK SCRGIEGKIV ALGPLLVKNQ GNVDLETIHW  240
SSQKGELSTL YISFGSENYL SKKQIQEIAK GLELSNVNFI WVDRSPKSVY FGVPVVAMPL  300
KLDQPVNSRL VGEGGFGVEV IRDENGEFDG KGVAKAINML FLGESGEGIR RRVKELSEKM  360
RMEEQEGAFG VVEELTRICI KKGGKRGDSD