PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97780.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Nin-like

Protein Properties

Length: 913aa MW: 101874 Da PI: 7.1641

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.6	6.1e-29	592	643	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l++l+++F++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ PIM97780.1 592 AEKTITLQVLRQHFAGSLKDAARNLGVCPTTLKRICRQHGIQRWPSRKIKKV 643 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 913 aa Download sequence
MEEGVLPLGT VRGTPSETFM DLDYMDELLL EGCWLEANGS EFSHFDSSNP ISPFDSSFAW 60 PTFEASNGES GGSPSIHGQD DRQRTCFPES LSISQSQGPQ HNKKSQSHVE NTYNAEQSEN 120 YLLEGSELSR RWWIGPRAST PVMERLIRAL SYIEEFSKDK DVLIQVWVPV TRGGKRVLTT 180 SNQPFSLDLN CARLAQYREI SVNYQFPAEE DSKEVVGLPG RVFRNKVPEW TPDVRFFTRD 240 EYPRVGHAQQ YDVRGTLAVP ILEQGTRSCL GVIEVVFTKQ KIQYRPELES VCKALEAVDL 300 RSSEVSGTPN LKTYDFSYQS ALPEILEVLR SACATHGLPL AQTWVPCILQ GKGGCLQSDE 360 NLKNCLSPVD SACYIGDSHI QGFHEACLEY HLLKGQGIVG RAFRTNQPCF LPDVSASSKT 420 EYPLSHHARM FGLKAAVAIR LRSICTGSAD FVLEFFLPMN CMDSQAQKKM LTSLSTIIQN 480 VCRTLRVVTD KELEEEYGLL HKKANSSPLS VSKQIPEASD DLQFSRPYLS QENHCESSAA 540 VSFFQNGKSR ETLAGHTQVT REGITFATNT STSGDGSSIY TNKTGEKRRI KAEKTITLQV 600 LRQHFAGSLK DAARNLGVCP TTLKRICRQH GIQRWPSRKI KKVGHSLQKI QRVIDSVQGA 660 SGVLQIKSFY SNFPELASPN ASRTTQFSNS KSSDNLKPFE VQPESSTLRP PAAASVSPSS 720 SCSQSSNSSE CCSSGAQPNA YSLSVAGQED PVVKEEPILK RTRSDANLHL SSDGPKLIPR 780 SQSHVSFCWP DKQRENHLPA SEVKVKNTQE KDAPRIKVTY GEDTIRFRMQ NNWRYKDLLQ 840 EISRRFGVDN PSGFHLKYLD DDAEWVLLTC DADLEECIDV CQLSRNHTIR LLFLHVSQAQ 900 FGRSSSIRGL LSL

Sequence ? help Back to Top

Protein Sequence Length: 913 aa Download sequence

MEEGVLPLGT VRGTPSETFM DLDYMDELLL EGCWLEANGS EFSHFDSSNP ISPFDSSFAW  60
PTFEASNGES GGSPSIHGQD DRQRTCFPES LSISQSQGPQ HNKKSQSHVE NTYNAEQSEN  120
YLLEGSELSR RWWIGPRAST PVMERLIRAL SYIEEFSKDK DVLIQVWVPV TRGGKRVLTT  180
SNQPFSLDLN CARLAQYREI SVNYQFPAEE DSKEVVGLPG RVFRNKVPEW TPDVRFFTRD  240
EYPRVGHAQQ YDVRGTLAVP ILEQGTRSCL GVIEVVFTKQ KIQYRPELES VCKALEAVDL  300
RSSEVSGTPN LKTYDFSYQS ALPEILEVLR SACATHGLPL AQTWVPCILQ GKGGCLQSDE  360
NLKNCLSPVD SACYIGDSHI QGFHEACLEY HLLKGQGIVG RAFRTNQPCF LPDVSASSKT  420
EYPLSHHARM FGLKAAVAIR LRSICTGSAD FVLEFFLPMN CMDSQAQKKM LTSLSTIIQN  480
VCRTLRVVTD KELEEEYGLL HKKANSSPLS VSKQIPEASD DLQFSRPYLS QENHCESSAA  540
VSFFQNGKSR ETLAGHTQVT REGITFATNT STSGDGSSIY TNKTGEKRRI KAEKTITLQV  600
LRQHFAGSLK DAARNLGVCP TTLKRICRQH GIQRWPSRKI KKVGHSLQKI QRVIDSVQGA  660
SGVLQIKSFY SNFPELASPN ASRTTQFSNS KSSDNLKPFE VQPESSTLRP PAAASVSPSS  720
SCSQSSNSSE CCSSGAQPNA YSLSVAGQED PVVKEEPILK RTRSDANLHL SSDGPKLIPR  780
SQSHVSFCWP DKQRENHLPA SEVKVKNTQE KDAPRIKVTY GEDTIRFRMQ NNWRYKDLLQ  840
EISRRFGVDN PSGFHLKYLD DDAEWVLLTC DADLEECIDV CQLSRNHTIR LLFLHVSQAQ  900
FGRSSSIRGL LSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein