PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97836.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WOX

Protein Properties

Length: 124aa MW: 14222 Da PI: 10.4605

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97836.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.8	2.8e-21	27	88	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L elF++ r+p+++++++++++l +++ ++V++WFqN++a+e++ PIM97836.1 27 KCGRWNPTSEQVKVLTELFRSgLRTPTTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 88 568***************99************************************97 PP
2	Wus_type_Homeobox	115.8	2.1e-37	27	90	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L+el++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ PIM97836.1 27 KCGRWNPTSEQVKVLTELFRSGLRTPTTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 90 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 124 aa Download sequence
MDDYSAGFRI RTSRGGTGGG GTGTGTKCGR WNPTSEQVKV LTELFRSGLR TPTTDQIQKI 60 SSQLSFYGKI ESKNVFYWFQ NHKARERQKR RRVLVDEDYD INMHLHDHTN KISSTKHKFG 120 DLPI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	89	93	KRRRV
2	89	118	KRRRVLVDEDYDINMHLHDHTNKISSTKHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	4e-43	WOX family protein