PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97868.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 306aa MW: 34524.4 Da PI: 6.973

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.9	3.5e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++++ G+g +W + ++++g++R++k+c++rw++yl PIM97868.1 14 KGPWSPEEDAILKEYIEKNGTGgNWIALPQKVGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	39.3	1.5e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd + +++ G++ W+ Ia+ ++ gRt++++k++w++ PIM97868.1 69 GEFSEEEDRMICSLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAILKEYIE KNGTGGNWIA LPQKVGLRRC GKSCRLRWLN 60 YLRPNIKHGE FSEEEDRMIC SLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGI 120 AQKNPHQATT YDPLSSNNHF LHSSSIPTAY DFCSNTNSYN TSQDRAFSRV YNREPIIPTF 180 TTLISSNSSG FMSPFDGTYN QLNQDSKNNS CSSSDGSQIT KEMEPDYRLF HGDYQSTYFT 240 NGVNENNQKF LLSGYSSSSS EAAVANGCLS GNPLDYSIEE IKQLMSCNNL NFFVDEIKTE 300 DKLLDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	7e-78	MYB family protein