PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM97875.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 866aa MW: 98956.4 Da PI: 8.4942

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM97875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79.5	6.1e-25	79	183	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...............tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 k+Y++YA +vGFs +++s++s+ +g++++++fvC+++g+++ + + +++ r +r+ ++t+Cka+++vk+++dg+w ++++ e PIM97875.1 79 KYYKDYAASVGFSAIIKASRRSRISGKFIDAKFVCTRYGSKRGSCLSensqltdvtssipvkNKRGRINRSWSKTDCKACMHVKRRQDGRWIISSFIRE 177 69***********************************998876666789*****98889999*************************** PP FAR1 85 HnHela 90 HnH+l+ PIM97875.1 178 HNHDLV 183 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 866 aa Download sequence
MRIDLEHPSC GNNKGSGLLN DTARFEVSKG GEATVTAPRI GGYDDTWKLP DGDGVTMSCQ 60 KSLEPHDSVE FESKEDAFKY YKDYAASVGF SAIIKASRRS RISGKFIDAK FVCTRYGSKR 120 GSCLSENSQL TDVTSSIPVK NKRGRINRSW SKTDCKACMH VKRRQDGRWI ISSFIREHNH 180 DLVRGQAGVR DTVISKFNLH PSNAVRVRQK KTCMSMSQQS GQMQKAEGHD SISSSSSGLR 240 LGSREGDAQV MLEYFASMQD ENPYFFYALD FNGEQLLKNV FWVDAKGRID YKNFGDVVLL 300 DTMYRKNEFK LPFVPFIGMN NHFQLLLLGN ALVADGSKST YVWLMHAWVR SMHGQAPKVI 360 LTDQEPALKE AIAEVLPGSR HCYCLWHILS KMQEKIGSVI RKHENFTNKF YKCILKSQTE 420 AQFEKRWWKL VDRFDLRNDE WIQSLYDDRL RWVPTLLKDV FLAGLSSIQR LESIASLLDK 480 CLLRKTSLKE FLHQYNIMLQ EKYEDEAKED FNTWHGQPGL KSPSPYGKQM ATIYTHAVFK 540 KFQVEVLGVV ACHPKIEMKD GATTTFKVQD CEENQVYKVT WNEKTSDTSC SCLLFEYNGF 600 LCRHVMIVLQ ISGVNNIPAK YILKRWTKDA KNRETMTQVG SVESRNQRYN GFCRHACKLG 660 DEGSLCQETY SIAFAALEEA LRKCESINNS VHPNPHPNDD LHEFEEVIRG KFTSRTNKEG 720 IISRKEKVHP EQEVTITGMH WWDQMGYLNI RASALDCSYG SEERVQGVGQ VNLRVPTTGE 780 ISCNSERVQV EQLNAIAPNG SECYHNQAHI QGLGQLNSTA SANDAHRFCL ERLHQMGQLH 840 FRSQNVQNSL LIHPNKQNQQ FKIMER

Sequence ? help Back to Top

Protein Sequence Length: 866 aa Download sequence

MRIDLEHPSC GNNKGSGLLN DTARFEVSKG GEATVTAPRI GGYDDTWKLP DGDGVTMSCQ  60
KSLEPHDSVE FESKEDAFKY YKDYAASVGF SAIIKASRRS RISGKFIDAK FVCTRYGSKR  120
GSCLSENSQL TDVTSSIPVK NKRGRINRSW SKTDCKACMH VKRRQDGRWI ISSFIREHNH  180
DLVRGQAGVR DTVISKFNLH PSNAVRVRQK KTCMSMSQQS GQMQKAEGHD SISSSSSGLR  240
LGSREGDAQV MLEYFASMQD ENPYFFYALD FNGEQLLKNV FWVDAKGRID YKNFGDVVLL  300
DTMYRKNEFK LPFVPFIGMN NHFQLLLLGN ALVADGSKST YVWLMHAWVR SMHGQAPKVI  360
LTDQEPALKE AIAEVLPGSR HCYCLWHILS KMQEKIGSVI RKHENFTNKF YKCILKSQTE  420
AQFEKRWWKL VDRFDLRNDE WIQSLYDDRL RWVPTLLKDV FLAGLSSIQR LESIASLLDK  480
CLLRKTSLKE FLHQYNIMLQ EKYEDEAKED FNTWHGQPGL KSPSPYGKQM ATIYTHAVFK  540
KFQVEVLGVV ACHPKIEMKD GATTTFKVQD CEENQVYKVT WNEKTSDTSC SCLLFEYNGF  600
LCRHVMIVLQ ISGVNNIPAK YILKRWTKDA KNRETMTQVG SVESRNQRYN GFCRHACKLG  660
DEGSLCQETY SIAFAALEEA LRKCESINNS VHPNPHPNDD LHEFEEVIRG KFTSRTNKEG  720
IISRKEKVHP EQEVTITGMH WWDQMGYLNI RASALDCSYG SEERVQGVGQ VNLRVPTTGE  780
ISCNSERVQV EQLNAIAPNG SECYHNQAHI QGLGQLNSTA SANDAHRFCL ERLHQMGQLH  840
FRSQNVQNSL LIHPNKQNQQ FKIMER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein