PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98002.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 247aa MW: 29191.8 Da PI: 9.6783

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.6	3.5e-19	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+++vk++G g+W+ ++r g++R +k+c++rw +yl PIM98002.1 21 KGPWTAEEDKLLIEYVKLHGEGRWNNVSRLAGLKRNGKSCRLRWVNYL 68 79********************************************97 PP
2	Myb_DNA-binding	49.9	7.2e-16	74	118	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ ++++++++G++ W+tIar ++ gRt++++k++w+++ PIM98002.1 74 RGQITPHEERVILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 118 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MSWGIMAQHM GWGAIEEGWR KGPWTAEEDK LLIEYVKLHG EGRWNNVSRL AGLKRNGKSC 60 RLRWVNYLRP DLKRGQITPH EERVILELHA RWGNRWSTIA RSLPGRTDNE IKNYWRTHFK 120 KKGKTSSESP EKAQARLLRR QQFQLQHQQQ QLRQQQLQQH QQDQIDNMRR ILALLDESDN 180 KVPTFTQLRQ EIAYPEEQGY GYSMINEYAT VPEGSNEDNI IWDGLWNLDD ITGRANYQHN 240 LATTTLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	1e-78	MYB family protein