PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98060.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 305aa MW: 34698 Da PI: 9.0906

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.2	3.5e-09	145	192	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+ l+P + +k Ka +L + ++Y++sLq PIM98060.1 145 SHSLAERVRRERISERMKLLQALVPGC----DKVTGKALMLDEIINYVQSLQ 192 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MAAFSSFQQH HPFSSSISLP NSTTATINNK LLDQPNNNIS QFNEDHSSSI FSVTTTTTTN 60 NNISMDSSSI VTDKYQKNPP SMPKKRKSKQ PSSPNSAQSK DMRDQENKGK RQKKVKACEE 120 KNKSKEEEPK GYIHVRARRG QATDSHSLAE RVRRERISER MKLLQALVPG CDKVTGKALM 180 LDEIINYVQS LQNQVEFLSM KLASVNPMIY DFGMDLEPFM FRPDQNLNSL PSQLPPMQQS 240 CSPTTANLYP IMDVNSANSL LFQQSQILNS LPDQDQRQML WEVEDQRQKF INQSEISNNS 300 LFSFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	84	110	KKRKSKQPSSPNSAQSKDMRDQENKGK
2	84	116	KKRKSKQPSSPNSAQSKDMRDQENKGKRQKKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-53	bHLH family protein