PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98074.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 335aa    MW: 36703.4 Da    PI: 4.9009
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98074.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-175099255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  PIM98074.1 50 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 99
                59*******.**********93....35999**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MEEAMRRLNG TITKNSDPLS PPTPAAPKRG SANKRSLKDG AAASGSGSMR YRGVRRRPWG  60
RYAAEIRDPQ SKERRWLGTF DTAEEAACAY DCAARAMRGV KARTNFVYSV SPAPTAAENL  120
VSSLNYGKSS QPSILGSRQF ASSSPSANPN FDFDNNSLNT LLLRDYINSS PSEYSDTLFS  180
NEQMPSTFMN NSCNSSTQNA PFMGSSPSST IVPDQMVFNY SSLNSENLEN NNTYDQSILT  240
NDCMGFFATE RSDSGLLQEV LNGFFPISKA EPLQTAADSF VLAPETGEVK SNRGFDNDYQ  300
IVPPQFENIG NDQNDSQGIN LFRGCWLSLF KTSSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-15ERF family protein