PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98075.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 496aa    MW: 54786.5 Da    PI: 5.8686
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98075.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS379.34.8e-1161254951374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.elykalppsetsekn..sseelaalklfsevsPilkfshl 96 
                 lv++L++cAeav+ +d++ a+ lL++l+ +a   g+++qR+a++f+++La rla+ ++ + +  ++p+ +  ++  s+++  al+l +e +P+++f+h+
  PIM98075.1 125 LVQQLISCAEAVACRDKAHASVLLSELHANALVFGSSFQRVASCFVQGLADRLASVQPlGAVGYVAPKMNI-MDtaSEKKEEALSLVYENCPYIQFGHF 222
                 689***************************************************94441333333333333.22348888899999************* PP

        GRAS  97 taNqaIleavegeervHiiDfdi....sqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                 +aN+ Ilea+ege+ vH++D+++    ++G QW +L+++La+Rp+++p+lRiT+vg     s ++ + +g+ L+ +A  lg+++ef+v v ++le+l++
  PIM98075.1 223 VANSSILEAFEGESLVHVVDLGMtlglQHGYQWHSLIESLANRPSPAPRLRITAVGL----SVDKFRVIGDELETYAIGLGLHLEFSV-VQSNLENLKP 316
                 ********************976222268889*************************....9*************************9.79******** PP

        GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
                 ++++v pgE+l+Vn+vlqlh +++es    +   +vL+++ +l Pkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ +  r+k+E++++
  PIM98075.1 317 DDIKVVPGEVLVVNSVLQLHCVVKESRGALN---SVLQIIHELAPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYF 412
                 ***********************88877777...8**************************************************************** PP

        GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+pvpl+  + +qak  l+ ++  +gy++ ee+g+lvlgWk++p+v++S+W+
  PIM98075.1 413 AEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQPVPLK--MLAQAKQWLSSINaCEGYTIVEEKGCLVLGWKSKPIVAASCWK 495
                 ***************************************7..6789*********9****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    
MAYSFLPQDS YNDQRDSPLS FSGLPTLEDD TTAVWLPTLY HESGDFKRLK RTPSLGEFSD  60
SSISSGCSIP RSSSVPKLHF RDHIWTYTQR YLAAEAVEEA AAAIIGAEDG GRVDGEEGNG  120
GGMKLVQQLI SCAEAVACRD KAHASVLLSE LHANALVFGS SFQRVASCFV QGLADRLASV  180
QPLGAVGYVA PKMNIMDTAS EKKEEALSLV YENCPYIQFG HFVANSSILE AFEGESLVHV  240
VDLGMTLGLQ HGYQWHSLIE SLANRPSPAP RLRITAVGLS VDKFRVIGDE LETYAIGLGL  300
HLEFSVVQSN LENLKPDDIK VVPGEVLVVN SVLQLHCVVK ESRGALNSVL QIIHELAPKV  360
LVLVEQDSSH NGPFFLGRFM EALHYYSAIF DSLDAMLPKY DTRRAKMEQF YFAEEIKNIV  420
SCEGPARVER HERVDQWRRR MSRAGFQPVP LKMLAQAKQW LSSINACEGY TIVEEKGCLV  480
LGWKSKPIVA ASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-83GRAS family protein