PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98208.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 228aa MW: 26251.6 Da PI: 10.333

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.3e-17	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+++++++G g W+ ++ + g++R++k+c++rw++yl PIM98208.1 12 KGAWTQEEDDLLKKCIERYGEGKWHQVPLRAGLNRCRKSCRLRWLNYL 59 79********************************************97 PP
2	Myb_DNA-binding	46.4	9e-15	65	109	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g +T +E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++ PIM98208.1 65 KGYFTRDEVDLIIRLHKLLGNR-WSLIAGRLP-GRTANNIKNFWNTH 109 688*****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MENNGGQVAV RKGAWTQEED DLLKKCIERY GEGKWHQVPL RAGLNRCRKS CRLRWLNYLR 60 PNIKKGYFTR DEVDLIIRLH KLLGNRWSLI AGRLPGRTAN NIKNFWNTHI QKNIRSIRAG 120 LGGETENCTR TKTITKSNII RPRPRTFSKL QVPAGCSTIP DHQPSKKNNK NPNDELQPSS 180 STMSLPRDQG TNDWTNNDPD ECIRWWSNLL EISTHDQNGD ETPFSFSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-63	MYB family protein