PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98229.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 254aa    MW: 29511.4 Da    PI: 4.8187
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.94.1e-1418971498
                T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 14 grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                + l++p  f++e+      skt+ l   +s + W+vk+  + k+g+y++t+GW +F+++ +L+   fvvF++++ s+   +v+vf+
  PIM98229.1 18 QKLRIPDVFVAEYRAY--LSKTVNLGAdLSENIWSVKI--EEKDGEYWFTEGWPRFAQDYKLQFANFVVFRFIDGSRI--RVTVFE 97
                4599*********755..7889999755**********..*******************************9974444..888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MKNLGPSFYK IMLLEFTQKL RIPDVFVAEY RAYLSKTVNL GADLSENIWS VKIEEKDGEY  60
WFTEGWPRFA QDYKLQFANF VVFRFIDGSR IRVTVFEPSG LEKEALFLVS HGTEESEESE  120
KSDSDNYDDD DDDDDDELAE LMDATKINKE TSFTFTWRKY MRNNMPIKGS FVKKMDLTKI  180
KGVKMRNLKG DVHDVRLYHY TDGRSGFGGG WAAFVDVSEF VLDETYKFEF IPNKNGELLV  240
QMILMKMGGK GRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.15e-11B3 family protein