PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98253.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 277aa MW: 32191.5 Da PI: 9.3979

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.9	9.7e-54	10	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL+++++++++++ ++i+evdiyk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nra+ sgyWkatg+dk+++s +++ PIM98253.1 10 LPPGFRFHPTDEELIMCYLRHQAASRPCPA-SIIPEVDIYKFDPWELPEKAEFGENEWYFFTPRDRKYPNGVRPNRAAVSGYWKATGTDKAIYS-GSRY 106 79**************************.89***********99999*************************************.99 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfykgr pkg ktdW+mheyrl PIM98253.1 107 VGVKKALVFYKGRPPKGIKTDWIMHEYRL 135 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MMVGRNSSEL PPGFRFHPTD EELIMCYLRH QAASRPCPAS IIPEVDIYKF DPWELPEKAE 60 FGENEWYFFT PRDRKYPNGV RPNRAAVSGY WKATGTDKAI YSGSRYVGVK KALVFYKGRP 120 PKGIKTDWIM HEYRLSESRS HPSKKNGSMR LDDWVLCRIY KKKNQARTPE RKVEDSLAQI 180 VAPSDASEPQ GYKFPRTCSL THLWEFDYMA SISQLLDENA YVSFNNQETI SNNGTRGVEK 240 YQPGQVPLQH TDTMKFHVNP MYELQLKRMF YTTGYGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-109	NAC family protein