PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98494.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 290aa    MW: 33205.3 Da    PI: 4.4045
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.8e-10170214655
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +++ r+RR++i ++ +eL +l+P  +      K++ ae+L+ A +YIk+Lq
  PIM98494.1 170 SIAARQRRRKITEKTQELGKLVPGgN------KMNTAEMLQSAYKYIKYLQ 214
                 6788*******************955......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEALSYYSNW GAFQQSESDM SFIDPLIQPE VSSELPPELL PFSDPWNIDN LFEPIDLLYS  60
ENNEVTPSGY NFNSLQTEPY IFQQEFEPLF NPKRQKGCNY QQLNYCDQFN PDFLNVLPPN  120
PRMPLQDYSP LEIVAPPPLP DFPTGPPSFS SGSYESIKKE NSSGSLSAQS IAARQRRRKI  180
TEKTQELGKL VPGGNKMNTA EMLQSAYKYI KYLQAQVGIL ESMDSYHQEN GEQFEVHEEM  240
QGLLESPLIQ EKLYSSEKCL VPQKFVQELS SDHHLIKSNP RLLPLVKQEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.13e-26bHLH family protein