PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98536.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 138aa MW: 15951.7 Da PI: 6.9595

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.8	6.6e-10	7	50	4	45
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT eE +++ d+ ++G + +W+ Ia+++g ++t+ ++ ++ PIM98536.1 7 WTWEENKQFEDCLVEFGDEypnRWSVIAARLG-NKTAAEVEQHYA 50 ***************99*********.********95 PP
2	Myb_DNA-binding	49.3	1.1e-15	79	124	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +rWT eE+ l++++ +++G g+W++I+r + k+Rt+ q+ s+ +ky PIM98536.1 79 QRWTNEEHSLFLQGLEKYGRGDWRSISRNLLKTRTPQQIASYAHKY 124 79******************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence
MSEGSGWTWE ENKQFEDCLV EFGDEYPNRW SVIAARLGNK TAAEVEQHYA ALLEDINAIQ 60 AGLIEPPPYA EGPKSTHGQR WTNEEHSLFL QGLEKYGRGD WRSISRNLLK TRTPQQIASY 120 AHKYFKRQKK GEQDKPRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58900.1	1e-38	MYB_related family protein