PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98537.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 134aa MW: 15567.2 Da PI: 4.3597

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.2	2.9e-11	6	50	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT eE +++ d+ ++G + +W++Ia+++g ++++ q++ ++ PIM98537.1 6 SWTWEENKQFEDCLVEFGEDypdRWSAIAAKLG-TKSATQVQQHYA 50 7******************************.********95 PP
2	Myb_DNA-binding	41.2	3.7e-13	79	125	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++WT E ++v + ++G+g W++Iar+m k+Rt+ q+ s+ kyl PIM98537.1 79 KPWTDKERRIFVLGLDKYGKGEWNSIARHMVKTRTPAQVASYAAKYL 125 58****************************************99996 PP

Sequence ? help Back to Top
Protein Sequence Length: 134 aa Download sequence
MSEESSWTWE ENKQFEDCLV EFGEDYPDRW SAIAAKLGTK SATQVQQHYA ALLEDINAIE 60 AGLIEPPKYE EKKEEDFGKP WTDKERRIFV LGLDKYGKGE WNSIARHMVK TRTPAQVASY 120 AAKYLEEEEE EDNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05790.1	3e-30	MYB family protein