PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98538.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 144aa MW: 16291.2 Da PI: 6.3592

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.1	6.5e-11	15	61	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT eE +++ d+ ++G + +W++Ia+++g ++t+ ++ ++ + PIM98538.1 15 SWTWEENKQFEDCLVEFGDDypdRWSAIAAKLG-TKTAAEVEQHYAVL 61 7***************99*********.********9765 PP
2	Myb_DNA-binding	50.2	6e-16	89	134	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT eE+ l++++ +++G+g+W I++++ k+Rt+ q+ s+ ++y PIM98538.1 89 KPWTDEEHSLFLEGLEKYGKGDWVGISKHVVKTRTPAQVASHAYNY 134 58*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence
MAKKGSSDGM SEGSSWTWEE NKQFEDCLVE FGDDYPDRWS AIAAKLGTKT AAEVEQHYAV 60 LLEDLDAIEA GLIEPPKYPD KMRNATHGKP WTDEEHSLFL EGLEKYGKGD WVGISKHVVK 120 TRTPAQVASH AYNYFKRQKK GRAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05790.1	1e-36	MYB family protein