PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98621.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 215aa    MW: 25066.3 Da    PI: 9.5959
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98621.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.94.5e-12104144451
         AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                 +GV+++  + +W A I++      +k+++lg+ g++eeAa+++++a+ 
  PIM98621.1 104 RGVYYK--NRKWQAAIKVD-----KKQIHLGTVGSKEEAARLYDRAAF 144
                 9**985..56********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MVSIRRRKLL GLCSGRNSSV ATLPQVCEHE HIPENCLEKT KPVSVHSLPL NDGYKSKVEI  60
TLETANGSPD LSASSPSKEQ FPEVKRRKRH RRKHLENQEP FNMRGVYYKN RKWQAAIKVD  120
KKQIHLGTVG SKEEAARLYD RAAFMCGREP NFELSEEEKK ELRNYKWDEF LAITRSAITN  180
KSQRRMRQRK PENDDWEGQH EPNDFSAFED DMLVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.25e-43ERF family protein