PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98661.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C3H
Protein Properties Length: 82aa    MW: 9214.56 Da    PI: 8.5089
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.72.6e-101437225
                -S---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                ++++C+f+++ G C++GdrC++ H
  PIM98661.1 14 DRVNCPFYFKIGACRHGDRCSRLH 37
                689********************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MAEHLASIFG TEKDRVNCPF YFKIGACRHG DRCSRLHTKP SISPTIVLSN MYQRPDMITP  60
GVDPQGQPLD PKKIQSHFEV SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44785.11e-33C3H family protein