PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM98685.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 193aa    MW: 21633.1 Da    PI: 8.5988
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM98685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.9e-11249454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  PIM98685.1  2 SHIAVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGVIEFIKEL 49
                89************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSHIAVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GVIEFIKELH QVLQSLEAKK  60
RRKSLSPSPG PSPRQCQLSP QPEESPFGNN FKELGACCNS PVADVEAKIS GSNVLLRTIS  120
RRIPGQIVRI INVLEKLSFE ILHLNISSME DTVLYSFVIK IGLECQVSVE ELALEVQQSF  180
CYGAAYIKGL PEI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-90bHLH family protein