PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98843.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 548aa MW: 60063.6 Da PI: 7.7675

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	57	3.3e-18	262	311	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f++Lre++P++ ++K +Ka+ L ++++YI+ Lq PIM98843.1 262 RSKHSATEQRRRSKINDRFQKLREIIPNS----DQKRDKASFLLEVIDYIQFLQ 311 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MELPQPRPLG TEGRKTTHDF LSLCSSQQDP TPPQGGYLKT HDFLQPLERV GKNATTSKEE 60 NKAGMSAVDR PPVPASPASV EHLLPGGIGT YSISYFNQRV LKPEGSLFTA QASSTNRNDE 120 NSNCSSYSGS GSGFTLWDES AVKKGKTGKE NIVADRHILR EAGVNIVGGQ WASLLEKPSQ 180 SSSNHKHNIS TFSSFSSSQP SSSQKNQSFM DMITSAKNDQ EEDDEEEEEE FVIKREPLSH 240 PKGNLSVKIE AKNTDQKPNT PRSKHSATEQ RRRSKINDRF QKLREIIPNS DQKRDKASFL 300 LEVIDYIQFL QEKVNRYESS YNVWNHEPSK MLQWQRNCHI AEGFIDHTGG AKTDSGPASM 360 VYATKFDENK GGVSPSLPIN GQNLVDSDIS TATTLKERSQ QPELTSKAAQ VQPNIFSFGR 420 AAIAASPVSP KHASDTHKTM TWPQLNRSCT ANKMKDQEVT IESGTINISS VYSQGLLNTL 480 TQALHNSGVD LSQASISVQI DLGKKANGVP HSSPSTAKED DVPAGLPRSR AAITGDDFGH 540 ALKRLRTS

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MELPQPRPLG TEGRKTTHDF LSLCSSQQDP TPPQGGYLKT HDFLQPLERV GKNATTSKEE  60
NKAGMSAVDR PPVPASPASV EHLLPGGIGT YSISYFNQRV LKPEGSLFTA QASSTNRNDE  120
NSNCSSYSGS GSGFTLWDES AVKKGKTGKE NIVADRHILR EAGVNIVGGQ WASLLEKPSQ  180
SSSNHKHNIS TFSSFSSSQP SSSQKNQSFM DMITSAKNDQ EEDDEEEEEE FVIKREPLSH  240
PKGNLSVKIE AKNTDQKPNT PRSKHSATEQ RRRSKINDRF QKLREIIPNS DQKRDKASFL  300
LEVIDYIQFL QEKVNRYESS YNVWNHEPSK MLQWQRNCHI AEGFIDHTGG AKTDSGPASM  360
VYATKFDENK GGVSPSLPIN GQNLVDSDIS TATTLKERSQ QPELTSKAAQ VQPNIFSFGR  420
AAIAASPVSP KHASDTHKTM TWPQLNRSCT ANKMKDQEVT IESGTINISS VYSQGLLNTL  480
TQALHNSGVD LSQASISVQI DLGKKANGVP HSSPSTAKED DVPAGLPRSR AAITGDDFGH  540
ALKRLRTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-112	bHLH family protein