PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98878.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

DBB

Protein Properties

Length: 209aa MW: 23406.3 Da PI: 5.5908

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98878.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.7	2e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H PIM98878.1 4 LCDVCESAAAILFCAADEAALCRACDDKVH 33 7*************************9998 PP
2	zf-B_box	26.6	1.2e-08	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 e ++C+ +e+ ++ ++Ce +++ lC +C + H g H PIM98878.1 52 EVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGgkrtH 91 789***************************9995544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCRACDD KVHMCNKLAS RHIRVGLAEP NEVPRCDICE 60 NAPAFFYCEI DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDKPGS IDEPGSQRVN 120 PGEAKREPPH ISSLRAKETE QNHWVSSDRN LVNSTDNDGK MENMFIDLNA RPQRMHGQAP 180 TNQAREDIEN NHESESVVPD GFFKREPDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	2e-82	DBB family protein