PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM98948.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GeBP

Protein Properties

Length: 187aa MW: 21063.8 Da PI: 10.1367

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM98948.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	35.2	3.4e-11	45	90	48	98
DUF573 48 kvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 ++s+sq++ KirrLK+K++k ++ + s++++hd++i+e+ ++iWg+ PIM98948.1 45 QFSESQITHKIRRLKEKYHKLART-----KSSIKTAHDRDIYEIGRQIWGK 90 89***************99998.....789***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MNSGSSSKSP SQPPSSSVKL FTEEDEINIL RSLLNSAGNS YTAGQFSESQ ITHKIRRLKE 60 KYHKLARTKS SIKTAHDRDI YEIGRQIWGK EKTRMPSPPP VDRERKEKAS ESSKEGAINW 120 SGFPYMMKEV SRAFPGCEDL YKQGLTSLGQ DILKGLEERW KALAEEEAAI QAKQARLFWG 180 RLKSGGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-07	GeBP family protein