PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99060.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

DBB

Protein Properties

Length: 300aa MW: 32303.1 Da PI: 6.0232

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.3	2.4e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC +C ++ H H++vpl PIM99060.1 4 QCNVCEAAEANVLCCADEAALCWSCDQKVHAAnklagkHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	29.3	1.8e-09	52	94	1	37
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 s+++kC+ ++e +fC +++ llC++C ++ H H PIM99060.1 52 SQMPKCDICQETAGYFFCLEDRALLCRKCDVAVHTAnplvsaH 94 689******99*****************99545555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MKIQCNVCEA AEANVLCCAD EAALCWSCDQ KVHAANKLAG KHQRVPLSTS SSQMPKCDIC 60 QETAGYFFCL EDRALLCRKC DVAVHTANPL VSAHQRFLLT GVKVGLEATE PGSSSSPAKI 120 QSHSSEKISG PDPPSLPKKT SPVSPTVQYS KNVPVQGIVA GDFSSSKLAF TGGSATGSIS 180 QWHLDDFLGL GDYNQNYNFM DNTSSKEDSG KLGDSDCSPI LRAADGELEG DEYTGQAPDS 240 FWAVPQMPSP PTASGLYWPK SSQDLPDAAV FVPDVSSPPM PNFHHYLSNG NNSKRRRHFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-94	DBB family protein