PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99108.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Dof
Protein Properties Length: 200aa    MW: 20978.5 Da    PI: 8.8419
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.57e-392382362
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 ++l+cprCdstntkfCyynny+ sqPr+fCkaCrryWt+GG+lr++PvGgg+rkn k+s
  PIM99108.1 23 PEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDIPVGGGSRKNAKRS 82
                57899***************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MATDMSERKA TRSSQVGVPP PEPEHLPCPR CDSTNTKFCY YNNYNFSQPR HFCKACRRYW  60
THGGTLRDIP VGGGSRKNAK RSRTIASSAT HTTTGGAAVF LPPHHDFLNF PAAASQFLVP  120
FAADHGGAVP FVSDGKVCGS FTSLLSTQGT GLWAMGGGIG PGLDDVSFGL GRTVWPFAGV  180
VEGGPTSGGG GGSSMAAHTW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.13e-41Dof family protein