PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99128.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 172aa MW: 20551.9 Da PI: 4.4745

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	137	153	1	17
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 ++C++C+k+F+r n++ PIM99128.1 137 FSCNICSKTFNRYNNMQ 153 89*********988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MNFLKFPLFY QQQPEKDDED HHEYYYETIE CLPLLSRLTE KKEVKTEELE EEDDEENHEK 60 NMENVTVALH IGLPDIGSGM DNIIDENQQK SYNLNKVEEE EEYVKSKKTK KSSSNINGER 120 RFWIPTPAQI LVGPMQFSCN ICSKTFNRYN NMQVSDDQYF FFMLNIKWIY HA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-16	C2H2 family protein