PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99202.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 240aa MW: 27428.7 Da PI: 8.884

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.4e-13	65	117	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +h +Er+RR+++ ++ Lr+llP ++K s ++ ++Av YIk+++ PIM99202.1 65 KKIMHRDIERQRRQEMAGLYASLRSLLPLeY---VKGKRSISDHMQQAVSYIKHME 117 5789***********************77...9*****************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MFPLQSDGFV LEDSLFFEQD KFLEDLLADC GDRVEGNKVI SDKGIKKRQK VEKTKDDSQS 60 SNESKKIMHR DIERQRRQEM AGLYASLRSL LPLEYVKGKR SISDHMQQAV SYIKHMEKKI 120 DEMQTKRDKL KKFSSSQRPE IHMYIADDPM SNTGGLCNSV KINPCRGGME ILITSSLNKE 180 GFPLSKVLTL LVGGGFDVIT CISTRVDAWF LHKIQIEVNN LRSINLIELQ EKLVNVIKFA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	132	QTKRDKLKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	3e-42	bHLH family protein