PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99217.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 249aa    MW: 29109.4 Da    PI: 9.24
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.31.3e-1320991296
                HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..EEEE CS
          B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.grsefelvvkv 96
                +++ l+lp  f++++ ++   +k  +l+ +sg++W+v+l  + +++++ +t+GW +F  + gLk  +f+vF+++ g+s+f   v+v
  PIM99217.1 20 TNH-LRLPHVFVQKYREN--LPKSAKLRISSGETWNVEL-EDMGDEEFCFTRGWTKFSADIGLKMWEFLVFYFNvGNSTF--DVSV 99
                444.9**********866..7788***************.5888888*************************87555777..5554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MGRKPKSRPS FYKVIFNELT NHLRLPHVFV QKYRENLPKS AKLRISSGET WNVELEDMGD  60
EEFCFTRGWT KFSADIGLKM WEFLVFYFNV GNSTFDVSVY GPSGCERQIS TRDKGSDSDE  120
DEVVLLSQDV TSINHNIDPQ LVAQEEAHPQ FQIYLKPHHR SRLTIHKKFA LAAGLASRKS  180
RKAVVLQYPP DQRCWPVLLD HDFPKLPYFR LDMARGWPEF MKKNGLKFMK TYLFEYIPDK  240
NVIEVKLVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.12e-15B3 family protein