PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99271.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family LBD
Protein Properties Length: 209aa    MW: 24246.1 Da    PI: 4.9404
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26067.33.5e-2127330100
      DUF260  30 fanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                 f+nvh+lFG+sn++k+l++l+ +e +++am+s++yeA++r r Pv+G+++vi+ l+ q +++ +el++++++
  PIM99271.1   2 FQNVHRLFGVSNITKTLNSLKSNEeQDEAMKSIIYEADMRERFPVHGCCAVIQLLRLQFQHAVKELQYVRAH 73 
                 9*******************655549****************************************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MFQNVHRLFG VSNITKTLNS LKSNEEQDEA MKSIIYEADM RERFPVHGCC AVIQLLRLQF  60
QHAVKELQYV RAHLAACREQ QQLNSNNNNN TNNNNNEINY ENGMNYGVNP FLSNENVSVF  120
VDNLLSENMN LASIQAQMEA LGMKEQEETT NLFPSDLERM QFSTRNIDDR QPYIDQTRET  180
FESSCQQMNL PRAEIDSRMK QTQVGLLRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47870.11e-15LBD family protein