PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99274.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family LBD
Protein Properties Length: 194aa    MW: 21372.4 Da    PI: 6.7394
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260139.98.7e-44401391100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++kll++lpee+r da++s+vyeA+ar+rdP+yG++g i++lq+q+++l+aela++++
  PIM99274.1  40 PCAACKILRRRCVENCVLAPYFPPTEPLKFTIAHRVFGASNIIKLLQELPEEQRADAVNSMVYEANARLRDPIYGCTGAIRHLQNQISELQAELAKAQA 138
                 7***********************************************************************************************998 PP

      DUF260 100 e 100
                 e
  PIM99274.1 139 E 139
                 7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MDYGRKHAAV AGGKMKTCPY SVSTTSSPPP PAPSRVILSP CAACKILRRR CVENCVLAPY  60
FPPTEPLKFT IAHRVFGASN IIKLLQELPE EQRADAVNSM VYEANARLRD PIYGCTGAIR  120
HLQNQISELQ AELAKAQAEI LNMQCQNASI SELISKQTLA TQNGEENNML DQENSNFFLD  180
DGNLGVSWGS LWTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.13e-61LBD family protein