PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99332.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

LBD

Protein Properties

Length: 156aa MW: 17498.7 Da PI: 8.0648

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	129.8	1.2e-40	5	104	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C++dC++apyfp+++p++fa+vhk++Gasnv k+l++lp ++r +a++sl yeA +r++dPvyG+vg+i+ l+qq+ +++ +la++++ PIM99332.1 5 RCAACKHLRRRCPSDCIFAPYFPSNNPRRFAYVHKIYGASNVGKILQDLPVNRRAEAADSLHYEAYCRIKDPVYGCVGMITILHQQIYNAQCQLARIQA 103 6**********************************************************************************************9998 PP DUF260 100 e 100 e PIM99332.1 104 E 104 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MNSTRCAACK HLRRRCPSDC IFAPYFPSNN PRRFAYVHKI YGASNVGKIL QDLPVNRRAE 60 AADSLHYEAY CRIKDPVYGC VGMITILHQQ IYNAQCQLAR IQAEIAALNA QSQSEVQHYN 120 QHQVESTGSG LSPSLLLDQN GGPNSTPFHD ISTWFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26620.1	3e-49	LBD family protein