PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99568.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 232aa    MW: 25798.6 Da    PI: 9.8514
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH406.9e-134490354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +h+e+ErrRR+riN  +++L+++lP++      K++Ka+ L +Av+ +++L
  PIM99568.1 44 NSHKEAERRRRKRINAHIATLKSILPSN-----IKPDKASLLGEAVRRVREL 90
                68*************************9.....6************999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MFSSPSFYEV GRSSDYYEHD LSSDQNPKLS PRSIAEAKAV AASNSHKEAE RRRRKRINAH  60
IATLKSILPS NIKPDKASLL GEAVRRVREL KKTAAELTSL DEDKNDNSNN TTLKVMFPSE  120
TDELKLCHCD NSGLIKVTFS CDDRPDIILD LIQALKAVEA KVVRAEMSTI GGRTKSVLWV  180
KLVSPSAAGS ESTYVGLGTL RRALKMVMEK SVLLPGTFQG LPCNKRPRYY HF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-36bHLH family protein