PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99603.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 261aa    MW: 28778.7 Da    PI: 5.231
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.5e-11146193455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PIM99603.1 146 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 193
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDPQGTAMMN DGAGVYNFAE IWQGFQMNAN ATSYNLGLDP MVIDERSNDS YPNHNSRKRR  60
DEDEQCAKGG VASTSNSNGG NNNNNNALNE DDCKRLKAEG SNENGPNKVE GEGNSSKAAE  120
QPEKPAELPK QDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL  180
VLDEIINYIQ SLQRQVEFLS MKLEAVNARG AIDGFPSKDF AQQTFEAPGM AFGSQSTREY  240
GRGSSPEWLH MQIGGSFERT S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.16e-82bHLH family protein