PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99646.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 395aa MW: 43845.8 Da PI: 7.0706

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	102.1	3.1e-32	96	200	1	99
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 f+kv tpsdv+k++rlv+pk++ae++ ++ +e++ l +ed++g++W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ + +l+ PIM99646.1 96 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRNGKQWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGvGElGKDRLF 194 89*************************966778999***********************************************666999999999 PP EEEE-S CS B3 94 vkvfrk 99 + ++r+ PIM99646.1 195 IDWRRR 200 999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MNFLSGRQGF YEEITGSRGL SSSSTSSSSF QHRGLPSYGY LHQQEPYGAA LPPEYSSPTN 60 NGGGSDEPPD DSDDHMPFRG EGTSSGAVVI QREHMFDKVV TPSDVGKLNR LVIPKQHAEK 120 YFPLDSSTNE KGLLLNFEDR NGKQWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS 180 FQRGVGELGK DRLFIDWRRR PDAPELPPSF PTLSIPNQFS FHRSINPSWN PLFMQPPLRD 240 YSHWLQSNAI TPQYHHQSRS PLGPYSYNNV VNGNPCPPGS IVYIRSAPGS SSGGVFGPQM 300 GMGQAQIRGE QMVFESVPVV QGKAAAKRLR LFGVNMDCPI SESDECDILS STTLPLLHQL 360 PPPPFDSSSS SSSTNLQLRP NDDKGKGSMS LDLDI

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MNFLSGRQGF YEEITGSRGL SSSSTSSSSF QHRGLPSYGY LHQQEPYGAA LPPEYSSPTN  60
NGGGSDEPPD DSDDHMPFRG EGTSSGAVVI QREHMFDKVV TPSDVGKLNR LVIPKQHAEK  120
YFPLDSSTNE KGLLLNFEDR NGKQWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS  180
FQRGVGELGK DRLFIDWRRR PDAPELPPSF PTLSIPNQFS FHRSINPSWN PLFMQPPLRD  240
YSHWLQSNAI TPQYHHQSRS PLGPYSYNNV VNGNPCPPGS IVYIRSAPGS SSGGVFGPQM  300
GMGQAQIRGE QMVFESVPVV QGKAAAKRLR LFGVNMDCPI SESDECDILS STTLPLLHQL  360
PPPPFDSSSS SSSTNLQLRP NDDKGKGSMS LDLDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	1e-73	B3 family protein