PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99681.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family FAR1
Protein Properties Length: 218aa    MW: 25245.7 Da    PI: 9.8501
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99681.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR194.71.1e-2949136290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +Y++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+ + k+ +++r++ra tr gCka+++vkkek+g+w+vtk+ +eHnH+l+
  PIM99681.1  49 YYDAYATNMGFVMRVDAFRRSMRDGSVVWRRLVCNKEGFRKCRPKR-SEARKPRAITREGCKAMIVVKKEKTGRWVVTKFFKEHNHPLV 136
                 8*******************************************99.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MDENQFAEYE AATIANSYGN DLVVDNEGHS YSEPYVGMVF DSEEAAKGYY DAYATNMGFV  60
MRVDAFRRSM RDGSVVWRRL VCNKEGFRKC RPKRSEARKP RAITREGCKA MIVVKKEKTG  120
RWVVTKFFKE HNHPLVVAPV NVRRSLQQSQ TPDEKDIKIR QLTAELQRER KRSAALQEQL  180
NSILKDMEEH SKHLSRNITN IIQSVNEIES RRIVFPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.15e-93FAR1 family protein