PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99815.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Nin-like
Protein Properties Length: 251aa    MW: 29357.6 Da    PI: 8.764
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99815.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.21.2e-26139188352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 + ++le+++kyF+ pi+ AAkeL+v+lTvLK++CR+++I RWPhRkiksl
  PIM99815.1 139 SALQLEQIQKYFDVPITRAAKELNVGLTVLKKRCRELNITRWPHRKIKSL 188
                 6799********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MVSKGLKLEN HNEVGGLFFE EPTTFGPWEQ QLGDIGGYNL GLPSLLEFEP FWLANQMSMT  60
SQVKLNDFEE ISNDLGMWDF DQQSFHNDNN HIIDYQNHDV VSTRMYECNS NPLMALTYQR  120
EFSSSNKNME VKRGRYKSSA LQLEQIQKYF DVPITRAAKE LNVGLTVLKK RCRELNITRW  180
PHRKIKSLKS LIHNVKELGL TNEIGMLEEH KRMVEKIPEI ELTERTKKLR QACFKANYKK  240
RRALQQQVTL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.12e-44Nin-like family protein