PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99832.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

LBD

Protein Properties

Length: 111aa MW: 12117.5 Da PI: 3.8662

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	59.5	9.7e-19	7	65	43	101
DUF260 43 lkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 ++ ++lpe++r da++s+vyeA+ar+rdP+yG++g i lq+q+++l+aela++++e+ PIM99832.1 7 GNIFTELPEDQRADAVNSMVYEANARLRDPIYGCTGAICYLQNQISELQAELAKAQAEI 65 578899************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 111 aa Download sequence
MIVASLGNIF TELPEDQRAD AVNSMVYEAN ARLRDPIYGC TGAICYLQNQ ISELQAELAK 60 AQAEILNMQC QNASLSEVIS KQTLATQNGQ ENSNFLVDDG NLGVSWGSFW A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	9e-24	LBD family protein