PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99959.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 279aa    MW: 31177.1 Da    PI: 7.076
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.72.7e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++lvd++++ G g+W++ ++  g+ R++k+c++rw +yl
       PIM99959.1 14 KGPWTPEEDQKLVDYINKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding49.31.1e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE++l ++++  lG++ W++Ia+ ++ gRt++++k+ w+++l
       PIM99959.1  67 RGPFSPEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MGRAPCCDKK GLKKGPWTPE EDQKLVDYIN KNGHGSWRSL PKLAGLLRCG KSCRLRWTNY  60
LRPDIKRGPF SPEEEKLVIQ LHGILGNRWA AIASQLPGRT DNEIKNLWNT HLKKRLLQMG  120
IDPQTHEPSS TSNGSLNRPP SSPSTRHMAQ WESARLEAEA RLSKESLSLI PSKLEGDFFL  180
RLWNTEVGET FRNLNKQENV ASESPMSSSS TKCGAVSGTT TETGLILSNQ HDESRSCIED  240
EMEDSSDSAL QLLLDFPGNN DMSFLGQPDC YSLYPAVFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-116MYB family protein