PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIM99979.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 187aa    MW: 21839.9 Da    PI: 7.4954
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIM99979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.4e-181362147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
                     +g+WT+eEd+ll+++v+q+G g+W+ +++       gRt++++k++w+++
       PIM99979.1 13 KGPWTPEEDKLLIEYVRQHGEGRWSCVSKSAArylPGRTDNEIKNYWRTH 62
                     79********************99988776666666************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MESWGVSEQG WRKGPWTPEE DKLLIEYVRQ HGEGRWSCVS KSAARYLPGR TDNEIKNYWR  60
THFKKRKTSD NQDKRKSHRQ TEQQKQEYDP KSTKASSDQA AEAMSDEEKG KKPTEMADQN  120
LENNQFLPMN YQQNCTNWSD YYNIIPVDNY LWGGLWNLDD QNGCSKMANQ NYPANVGNHS  180
RGGGYIF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17478KRKSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30210.17e-29MYB family protein