PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00086.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 383aa    MW: 43591.5 Da    PI: 7.5726
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.88.4e-13205250454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +h e+Er+RR+++N++f  Lr+++P+       +++Ka+ L  Av YI++L
  PIN00086.1 205 NHVEAERQRREKLNQRFYALRSVVPNV-----SRMDKASLLADAVTYINEL 250
                 899***********************6.....4***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MDIEIISSTS PPLSLQNRLQ FILQNQREWW NYIIFWRASK STAPVGRLVL TWGDGYYRSN  60
KFDTPVNDHE PEWFYMGSVT RSFSGDDDVI FRAFASGSTF WLVGDQLELQ FFERAKEAHL  120
HGIRTLLLLP TSCGVYELGS SELIKEDWGI KNFITNYDLD YGQVQNNSYE NQTSFTGNSD  180
ISGTVSPLRR KSRNSTKLRE AMAVNHVEAE RQRREKLNQR FYALRSVVPN VSRMDKASLL  240
ADAVTYINEL KAKISDLETK FTMKQHQNKI GFLELYDVKS STSVSTAAAV AATAITGDCG  300
YNPAMHIEVK ILGSEAMIKV QSQDENYPCA RLMNVLRDLR FEISHASVSS VRTMMFQDVV  360
IKVPDGVCNE EALRTAILRK MRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.11e-65bHLH family protein