PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00165.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 266aa MW: 30268.4 Da PI: 4.379

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.4	7.6e-21	64	117	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq + Le+ Fe+++++ +++++LA+klgL+ rqV vWFqNrRa++k PIN00165.1 64 KKRRLTPEQAHLLEKSFEEENKLEPDRKTQLAAKLGLQPRQVAVWFQNRRARWK 117 5678*************************************************9 PP
2	HD-ZIP_I/II	132.5	1.5e-42	63	154	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eq++lLE+sFeee+kLep+rK++la +LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l+++ +++ ke+++L++el PIN00165.1 63 EKKRRLTPEQAHLLEKSFEEENKLEPDRKTQLAAKLGLQPRQVAVWFQNRRARWKTKQLERDYDQLKSSYDSLAANYDSILKENDKLKAELL 154 69**************************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MESGRIFFDP SFNGNMSFLG KRDSVFRGAK TVMNMEETSK RRPFFTTVDE LYDEEYYDEQ 60 LPEKKRRLTP EQAHLLEKSF EEENKLEPDR KTQLAAKLGL QPRQVAVWFQ NRRARWKTKQ 120 LERDYDQLKS SYDSLAANYD SILKENDKLK AELLSLTEKL LPKEPAVEPA EYHKPSPQPV 180 GAPPTKVEDR LSTGSDGSAV VDDDSPQLLD SGDSYFPDDK YDHVCEAAVD GVNSEEDDGS 240 EGGGSYFSDV FAATEPQEPV GWFIWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	120	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	3e-81	HD-ZIP family protein